TransgenicToolUseSlotAnnotation

A slot annotation to capture the use(s) of a particular TransgenicTool with associated evidence.

classDiagram SlotAnnotation <|-- TransgenicToolUseSlotAnnotation TransgenicToolUseSlotAnnotation : created_by TransgenicToolUseSlotAnnotation : date_created TransgenicToolUseSlotAnnotation : date_updated TransgenicToolUseSlotAnnotation : db_date_created TransgenicToolUseSlotAnnotation : db_date_updated TransgenicToolUseSlotAnnotation : evidence TransgenicToolUseSlotAnnotation : internal TransgenicToolUseSlotAnnotation : obsolete TransgenicToolUseSlotAnnotation : single_transgenic_tool TransgenicToolUseSlotAnnotation : updated_by TransgenicToolUseSlotAnnotation : uses

URI: alliance:TransgenicToolUseSlotAnnotation

Parent Classes

AuditedObject
- SlotAnnotation
  - TransgenicToolUseSlotAnnotation

Slots

Name	Description
created_by	The individual that created the entity.
date_created	The date on which an entity was created. This can be applied to nodes or edges.
date_updated	Date on which an entity was last modified.
db_date_created	The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated	Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
evidence	The evidence that supports some assertion.
internal	Classifies the entity as private (for internal use) or not (for public use).
obsolete	Entity is no longer current.
single_transgenic_tool	None
updated_by	The individual that last modified the entity.
uses	A list of FBcv terms with namespace 'experimental_tool_descriptor'.

Mappings

Mapping Type	Mapped Value
self	['alliance:TransgenicToolUseSlotAnnotation']
native	['alliance:TransgenicToolUseSlotAnnotation']

LinkML Specification

Direct

name: TransgenicToolUseSlotAnnotation
description: A slot annotation to capture the use(s) of a particular TransgenicTool
  with associated evidence.
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: SlotAnnotation
slots:
- single_transgenic_tool
- uses
slot_usage:
  single_transgenic_tool:
    name: single_transgenic_tool
    required: true
  uses:
    name: uses
    required: true

Induced

name: TransgenicToolUseSlotAnnotation
description: A slot annotation to capture the use(s) of a particular TransgenicTool
  with associated evidence.
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: SlotAnnotation
slot_usage:
  single_transgenic_tool:
    name: single_transgenic_tool
    required: true
  uses:
    name: uses
    required: true
attributes:
  single_transgenic_tool:
    name: single_transgenic_tool
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: single_transgenic_tool
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - TransgenicToolUseSlotAnnotation
    - TransgenicToolSymbolSlotAnnotation
    - TransgenicToolFullNameSlotAnnotation
    - TransgenicToolSynonymSlotAnnotation
    range: TransgenicTool
    required: true
    multivalued: false
  uses:
    name: uses
    description: A list of FBcv terms with namespace 'experimental_tool_descriptor'.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: uses
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - CassetteUseSlotAnnotation
    - TransgenicToolUseSlotAnnotation
    range: FBCVTerm
    required: true
    multivalued: true
  evidence:
    name: evidence
    description: The evidence that supports some assertion.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: evidence
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - Note
    - SlotAnnotation
    - EvidenceAssociation
    range: InformationContentEntity
    multivalued: true
  created_by:
    name: created_by
    description: The individual that created the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    alias: created_by
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    range: Person
    multivalued: false
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by:
    name: updated_by
    description: The individual that last modified the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    alias: updated_by
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    range: Person
    multivalued: false
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: TransgenicToolUseSlotAnnotation
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean