Image

The set of files and metadata that constitute an image.

classDiagram CurieObject <|-- Image Image : created_by Image : cropped_from Image : curie Image : date_created Image : date_updated Image : db_date_created Image : db_date_updated Image : height Image : image_file Image : image_medium_file Image : image_thumbnail_file Image : image_x_origin Image : image_y_origin Image : internal Image : obsolete Image : related_figure Image : secondary_identifiers Image : updated_by Image : video_still Image : width

URI: alliance:Image

Parent Classes

AuditedObject
- CurieObject
  - Image

Slots

Name	Description
created_by	The individual that created the entity.
cropped_from	Another larger image from which this image was cropped.
curie	A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
date_created	The date on which an entity was created. This can be applied to nodes or edges.
date_updated	Date on which an entity was last modified.
db_date_created	The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated	Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
height	The height of the image (pixels).
image_file	The file representing the full-sized version of this image.
image_medium_file	The file representing a medium-sized version of this image.
image_thumbnail_file	The file representing the thumbnail of this image.
image_x_origin	The x coordinate within a larger source image from which the crop begins.
image_y_origin	The y coordinate within a larger source image from which the crop begins.
internal	Classifies the entity as private (for internal use) or not (for public use).
obsolete	Entity is no longer current.
related_figure	The figure to which the image belongs.
secondary_identifiers	None
updated_by	The individual that last modified the entity.
video_still	An image represents a video still.
width	The width of the image (pixels).

Mappings

Mapping Type	Mapped Value
self	['alliance:Image']
native	['alliance:Image']

LinkML Specification

Direct

name: Image
description: The set of files and metadata that constitute an image.
notes:
- Do we need a separate Image.label, or can it just use the label from the parent
  Figure entity?
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: CurieObject
slots:
- related_figure
- width
- height
- image_file
- image_medium_file
- image_thumbnail_file
- cropped_from
- image_x_origin
- image_y_origin
- video_still
- secondary_identifiers
slot_usage:
  related_figure:
    name: related_figure
    description: The figure to which the image belongs.
    domain_of:
    - Image
    required: true
  image_x_origin:
    name: image_x_origin
    description: The x coordinate within a larger source image from which the crop
      begins.
    domain: Image
    domain_of:
    - Image
    - ImagePane
  image_y_origin:
    name: image_y_origin
    description: The y coordinate within a larger source image from which the crop
      begins.
    domain: Image
    domain_of:
    - Image
    - ImagePane

Induced

name: Image
description: The set of files and metadata that constitute an image.
notes:
- Do we need a separate Image.label, or can it just use the label from the parent
  Figure entity?
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: CurieObject
slot_usage:
  related_figure:
    name: related_figure
    description: The figure to which the image belongs.
    domain_of:
    - Image
    required: true
  image_x_origin:
    name: image_x_origin
    description: The x coordinate within a larger source image from which the crop
      begins.
    domain: Image
    domain_of:
    - Image
    - ImagePane
  image_y_origin:
    name: image_y_origin
    description: The y coordinate within a larger source image from which the crop
      begins.
    domain: Image
    domain_of:
    - Image
    - ImagePane
attributes:
  related_figure:
    name: related_figure
    description: The figure to which the image belongs.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    multivalued: false
    alias: related_figure
    owner: Image
    domain_of:
    - Image
    range: Figure
    required: true
  width:
    name: width
    description: The width of the image (pixels).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: width
    owner: Image
    domain_of:
    - Image
    - ImagePane
    range: integer
    required: true
  height:
    name: height
    description: The height of the image (pixels).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: height
    owner: Image
    domain_of:
    - Image
    - ImagePane
    range: integer
    required: true
  image_file:
    name: image_file
    description: The file representing the full-sized version of this image.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: image_file
    owner: Image
    domain_of:
    - Image
    range: File
    required: true
  image_medium_file:
    name: image_medium_file
    description: The file representing a medium-sized version of this image.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: image_medium_file
    owner: Image
    domain_of:
    - Image
    range: File
    required: true
  image_thumbnail_file:
    name: image_thumbnail_file
    description: The file representing the thumbnail of this image.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: image_thumbnail_file
    owner: Image
    domain_of:
    - Image
    range: File
    required: true
  cropped_from:
    name: cropped_from
    description: Another larger image from which this image was cropped.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: cropped_from
    owner: Image
    domain_of:
    - Image
    range: Image
    required: false
  image_x_origin:
    name: image_x_origin
    description: The x coordinate within a larger source image from which the crop
      begins.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: image_x_origin
    owner: Image
    domain_of:
    - Image
    - ImagePane
    range: integer
    required: false
  image_y_origin:
    name: image_y_origin
    description: The y coordinate within a larger source image from which the crop
      begins.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    multivalued: false
    alias: image_y_origin
    owner: Image
    domain_of:
    - Image
    - ImagePane
    range: integer
    required: false
  video_still:
    name: video_still
    description: An image represents a video still.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Image
    alias: video_still
    owner: Image
    domain_of:
    - Image
    range: boolean
  secondary_identifiers:
    name: secondary_identifiers
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - secondary_ids
    multivalued: true
    alias: secondary_identifiers
    owner: Image
    domain_of:
    - SequenceTargetingReagent
    - SequenceTargetingReagentDTO
    - Reagent
    - ReagentDTO
    - OntologyTerm
    - Figure
    - Image
    - ExternalDataBaseEntity
    - ExternalDataBaseEntityDTO
    range: uriorcurie
  curie:
    name: curie
    description: A unique identifier for a thing. Must be either a CURIE shorthand
      for a URI or a complete URI
    from_schema: https://github.com/alliance-genome/agr_curation_schema/core.yaml
    multivalued: false
    alias: curie
    owner: Image
    domain_of:
    - CurieObject
    - Identifier
    - OntologyTerm
    - Laboratory
    - Annotation
    - ExternalDataBaseEntityDTO
    - GeneNomenclatureSet
    range: uriorcurie
  created_by:
    name: created_by
    description: The individual that created the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    multivalued: false
    alias: created_by
    owner: Image
    domain_of:
    - AuditedObject
    range: Person
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by:
    name: updated_by
    description: The individual that last modified the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    multivalued: false
    alias: updated_by
    owner: Image
    domain_of:
    - AuditedObject
    range: Person
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: Image
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean