ExperimentalConditionDTO

Ingest class for describing the environmental context in which an experiment is carried out

classDiagram AuditedObjectDTO <|-- ExperimentalConditionDTO ExperimentalConditionDTO : condition_anatomy_curie ExperimentalConditionDTO : condition_chemical_curie ExperimentalConditionDTO : condition_class_curie ExperimentalConditionDTO : condition_free_text ExperimentalConditionDTO : condition_gene_ontology_curie ExperimentalConditionDTO : condition_id_curie ExperimentalConditionDTO : condition_quantity ExperimentalConditionDTO : condition_taxon_curie ExperimentalConditionDTO : created_by_curie ExperimentalConditionDTO : date_created ExperimentalConditionDTO : date_updated ExperimentalConditionDTO : db_date_created ExperimentalConditionDTO : db_date_updated ExperimentalConditionDTO : internal ExperimentalConditionDTO : obsolete ExperimentalConditionDTO : updated_by_curie

URI: alliance:ExperimentalConditionDTO

Parent Classes

AuditedObjectDTO
- ExperimentalConditionDTO

Slots

Name	Description
condition_anatomy_curie	Curie of AnatomicalTerm associated with condition
condition_chemical_curie	Curie of ChemicalTerm associated with condition
condition_class_curie	Curie of ZECOTerm describing condition class
condition_free_text	Free-text description of the experimental condition
condition_gene_ontology_curie	Curie of GOTerm associated with condition
condition_id_curie	Curie of ExperimentalConditionOntologyTerm describing condition
condition_quantity	None
condition_taxon_curie	Curie of NCBITaxonTerm associated with condition
created_by_curie	Curie of the Person object representing the individual that created the entity
date_created	The date on which an entity was created. This can be applied to nodes or edges.
date_updated	Date on which an entity was last modified.
db_date_created	The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated	Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
internal	Classifies the entity as private (for internal use) or not (for public use).
obsolete	Entity is no longer current.
updated_by_curie	Curie of the Person object representing the individual that updated the entity

Mappings

Mapping Type	Mapped Value
self	['alliance:ExperimentalConditionDTO']
native	['alliance:ExperimentalConditionDTO']

LinkML Specification

Direct

name: ExperimentalConditionDTO
description: Ingest class for describing the environmental context in which an experiment
  is carried out
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObjectDTO
slots:
- condition_class_curie
- condition_id_curie
- condition_free_text
- condition_quantity
- condition_anatomy_curie
- condition_gene_ontology_curie
- condition_taxon_curie
- condition_chemical_curie

Induced

name: ExperimentalConditionDTO
description: Ingest class for describing the environmental context in which an experiment
  is carried out
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObjectDTO
attributes:
  condition_class_curie:
    name: condition_class_curie
    description: Curie of ZECOTerm describing condition class
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_class_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
    required: true
  condition_id_curie:
    name: condition_id_curie
    description: Curie of ExperimentalConditionOntologyTerm describing condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_id_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
  condition_free_text:
    name: condition_free_text
    description: Free-text description of the experimental condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalCondition
    alias: condition_free_text
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalCondition
    - ExperimentalConditionDTO
    range: string
    required: false
  condition_quantity:
    name: condition_quantity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalCondition
    alias: condition_quantity
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalCondition
    - ExperimentalConditionDTO
    range: string
  condition_anatomy_curie:
    name: condition_anatomy_curie
    description: Curie of AnatomicalTerm associated with condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_anatomy_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
  condition_gene_ontology_curie:
    name: condition_gene_ontology_curie
    description: Curie of GOTerm associated with condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_gene_ontology_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
  condition_taxon_curie:
    name: condition_taxon_curie
    description: Curie of NCBITaxonTerm associated with condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_taxon_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
  condition_chemical_curie:
    name: condition_chemical_curie
    description: Curie of ChemicalTerm associated with condition
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: ExperimentalConditionDTO
    alias: condition_chemical_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - ExperimentalConditionDTO
    range: string
  created_by_curie:
    name: created_by_curie
    description: Curie of the Person object representing the individual that created
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: created_by_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by_curie:
    name: updated_by_curie
    description: Curie of the Person object representing the individual that updated
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: updated_by_curie
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: ExperimentalConditionDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean