CrossReferenceDTO

None

classDiagram AuditedObjectDTO <|-- CrossReferenceDTO CrossReferenceDTO : created_by_curie CrossReferenceDTO : date_created CrossReferenceDTO : date_updated CrossReferenceDTO : db_date_created CrossReferenceDTO : db_date_updated CrossReferenceDTO : display_name CrossReferenceDTO : internal CrossReferenceDTO : obsolete CrossReferenceDTO : page_area CrossReferenceDTO : prefix CrossReferenceDTO : referenced_curie CrossReferenceDTO : updated_by_curie

URI: alliance:CrossReferenceDTO

Parent Classes

AuditedObjectDTO
- CrossReferenceDTO

Slots

Name	Description
created_by_curie	Curie of the Person object representing the individual that created the entity
date_created	The date on which an entity was created. This can be applied to nodes or edges.
date_updated	Date on which an entity was last modified.
db_date_created	The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated	Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
display_name	None
internal	Classifies the entity as private (for internal use) or not (for public use).
obsolete	Entity is no longer current.
page_area	None
prefix	Denormalization to help with classifying types of crossReferences, distinguishing DOIs from PMC ids, etc.
referenced_curie	Curie of the thing being referenced in a CrossReference
updated_by_curie	Curie of the Person object representing the individual that updated the entity

Mappings

Mapping Type	Mapped Value
self	['alliance:CrossReferenceDTO']
native	['alliance:CrossReferenceDTO']

LinkML Specification

Direct

name: CrossReferenceDTO
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObjectDTO
slots:
- referenced_curie
- page_area
- display_name
- prefix
slot_usage:
  prefix:
    name: prefix
    domain_of:
    - CrossReferenceDTO
    - ExternalDatabaseLink
    - ResourceDescriptor
    required: true

Induced

name: CrossReferenceDTO
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObjectDTO
slot_usage:
  prefix:
    name: prefix
    domain_of:
    - CrossReferenceDTO
    - ExternalDatabaseLink
    - ResourceDescriptor
    required: true
attributes:
  referenced_curie:
    name: referenced_curie
    description: Curie of the thing being referenced in a CrossReference
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: referenced_curie
    owner: CrossReferenceDTO
    domain_of:
    - CrossReference
    - CrossReferenceDTO
    range: uriorcurie
    required: true
  page_area:
    name: page_area
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    multivalued: false
    alias: page_area
    owner: CrossReferenceDTO
    domain_of:
    - CrossReferenceDTO
    range: string
    required: true
  display_name:
    name: display_name
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    multivalued: false
    alias: display_name
    owner: CrossReferenceDTO
    domain_of:
    - CrossReference
    - CrossReferenceDTO
    - Species
    range: string
    required: true
  prefix:
    name: prefix
    description: Denormalization to help with classifying types of crossReferences,
      distinguishing DOIs from PMC ids, etc.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    multivalued: false
    alias: prefix
    owner: CrossReferenceDTO
    domain_of:
    - CrossReferenceDTO
    - ExternalDatabaseLink
    - ResourceDescriptor
    range: string
    required: true
  created_by_curie:
    name: created_by_curie
    description: Curie of the Person object representing the individual that created
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: created_by_curie
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by_curie:
    name: updated_by_curie
    description: Curie of the Person object representing the individual that updated
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: updated_by_curie
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: CrossReferenceDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean