BulkLoadFile

This class is used to hold version of the files being loaded

classDiagram AuditedObject <|-- BulkLoadFile BulkLoadFile : alliance_member_release_version BulkLoadFile : bulk_load BulkLoadFile : bulkload_status BulkLoadFile : created_by BulkLoadFile : date_created BulkLoadFile : date_last_loaded BulkLoadFile : date_updated BulkLoadFile : db_date_created BulkLoadFile : db_date_updated BulkLoadFile : error_message BulkLoadFile : file_size BulkLoadFile : internal BulkLoadFile : linkml_schema_version BulkLoadFile : local_file_path BulkLoadFile : md5_sum BulkLoadFile : obsolete BulkLoadFile : record_count BulkLoadFile : s3_path BulkLoadFile : s3_url BulkLoadFile : updated_by

URI: alliance:BulkLoadFile

Parent Classes

AuditedObject
- BulkLoadFile

Slots

Name	Description
alliance_member_release_version	Version of Alliance member/MOD release used for submitted file
bulk_load	A link back to the parent bulk load
bulkload_status	Status used to capture the progress of the load
created_by	The individual that created the entity.
date_created	The date on which an entity was created. This can be applied to nodes or edges.
date_last_loaded	Indicates when the file was last loaded
date_updated	Date on which an entity was last modified.
db_date_created	The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated	Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
error_message	Error message for curation reports
file_size	The size of the file
internal	Classifies the entity as private (for internal use) or not (for public use).
linkml_schema_version	Release of LinkML for which the file was generated and submitted
local_file_path	Local file path to where the file has been saved for processing
md5_sum	Generated md5Sum of the file that has been uploaded
obsolete	Entity is no longer current.
record_count	The number of records found in the file
s3_path	The relative path to the file in the S3 bucket
s3_url	The full URL to the file from S3
updated_by	The individual that last modified the entity.

Mappings

Mapping Type	Mapped Value
self	['alliance:BulkLoadFile']
native	['alliance:BulkLoadFile']

LinkML Specification

Direct

name: BulkLoadFile
description: This class is used to hold version of the files being loaded
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObject
slots:
- bulkload_status
- md5_sum
- local_file_path
- file_size
- s3_path
- s3_url
- record_count
- error_message
- bulk_load
- date_last_loaded
- linkml_schema_version
- alliance_member_release_version

Induced

name: BulkLoadFile
description: This class is used to hold version of the files being loaded
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: AuditedObject
attributes:
  bulkload_status:
    name: bulkload_status
    description: Status used to capture the progress of the load
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: bulkload_status
    owner: BulkLoadFile
    domain_of:
    - BulkLoad
    - BulkLoadFile
    range: bulk_load_status_enum
  md5_sum:
    name: md5_sum
    description: Generated md5Sum of the file that has been uploaded
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: md5_sum
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: string
  local_file_path:
    name: local_file_path
    description: Local file path to where the file has been saved for processing
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: local_file_path
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: string
  file_size:
    name: file_size
    description: The size of the file
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: file_size
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: integer
  s3_path:
    name: s3_path
    description: The relative path to the file in the S3 bucket
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: s3_path
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: string
  s3_url:
    name: s3_url
    description: The full URL to the file from S3
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: s3_url
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: string
  record_count:
    name: record_count
    description: The number of records found in the file
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: record_count
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: integer
  error_message:
    name: error_message
    description: Error message for curation reports
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: CurationReport
    alias: error_message
    owner: BulkLoadFile
    domain_of:
    - CurationReport
    - BulkLoad
    - BulkLoadFile
    range: string
  bulk_load:
    name: bulk_load
    description: A link back to the parent bulk load
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: bulk_load
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: BulkLoad
  date_last_loaded:
    name: date_last_loaded
    description: Indicates when the file was last loaded
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: BulkLoadFile
    alias: date_last_loaded
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: datetime
  linkml_schema_version:
    name: linkml_schema_version
    description: Release of LinkML for which the file was generated and submitted
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: linkml_schema_version
    owner: BulkLoadFile
    domain_of:
    - BulkLoadFile
    range: string
  alliance_member_release_version:
    name: alliance_member_release_version
    description: Version of Alliance member/MOD release used for submitted file
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: Ingest
    alias: alliance_member_release_version
    owner: BulkLoadFile
    domain_of:
    - Ingest
    - BulkLoadFile
    range: string
  created_by:
    name: created_by
    description: The individual that created the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    multivalued: false
    alias: created_by
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    range: Person
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by:
    name: updated_by
    description: The individual that last modified the entity.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObject
    multivalued: false
    alias: updated_by
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    range: Person
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: BulkLoadFile
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean