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AlleleImageAssociationDTO

The relationship between an allele and an image.

classDiagram EvidenceAssociationDTO <|-- AlleleImageAssociationDTO AlleleImageAssociationDTO : allele_identifier AlleleImageAssociationDTO : created_by_curie AlleleImageAssociationDTO : date_created AlleleImageAssociationDTO : date_updated AlleleImageAssociationDTO : db_date_created AlleleImageAssociationDTO : db_date_updated AlleleImageAssociationDTO : evidence_curies AlleleImageAssociationDTO : image_curie AlleleImageAssociationDTO : internal AlleleImageAssociationDTO : obsolete AlleleImageAssociationDTO : primary_image AlleleImageAssociationDTO : relation_name AlleleImageAssociationDTO : updated_by_curie

URI: alliance:AlleleImageAssociationDTO

Parent Classes

Slots

Name Description
allele_identifier Identifier (curie/primary_external_id/mod_internal_id) of the allele
created_by_curie Curie of the Person object representing the individual that created the entity
date_created The date on which an entity was created. This can be applied to nodes or edges.
date_updated Date on which an entity was last modified.
db_date_created The date on which an entity was created in the Alliance database. This is distinct from date_created, which represents the date when the entity was originally created (i.e. at the MOD for imported data).
db_date_updated Date on which an entity was last modified in the Alliance database. This is distinct from date_updated, which represents the date when the entity was last modified and may predate import into the Alliance database.
evidence_curies Curies of InformationContentEntity objects given as evidence
image_curie None
internal Classifies the entity as private (for internal use) or not (for public use).
obsolete Entity is no longer current.
primary_image Can be null; if false, maybe you would show all the images. We need to revisit this issue.
relation_name Name of VocabularyTerm representing relation of an Association
updated_by_curie Curie of the Person object representing the individual that updated the entity

Mappings

Mapping Type Mapped Value
self ['alliance:AlleleImageAssociationDTO']
native ['alliance:AlleleImageAssociationDTO']

LinkML Specification

Direct

name: AlleleImageAssociationDTO
description: The relationship between an allele and an image.
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: EvidenceAssociationDTO
slots:
- allele_identifier
- relation_name
- image_curie
- primary_image
slot_usage:
  primary_image:
    name: primary_image
    description: Can be null; if false, maybe you would show all the images. We need
      to revisit this issue.
    domain_of:
    - AlleleImageAssociation
    - AlleleImageAssociationDTO

Induced

name: AlleleImageAssociationDTO
description: The relationship between an allele and an image.
from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
is_a: EvidenceAssociationDTO
slot_usage:
  primary_image:
    name: primary_image
    description: Can be null; if false, maybe you would show all the images. We need
      to revisit this issue.
    domain_of:
    - AlleleImageAssociation
    - AlleleImageAssociationDTO
attributes:
  allele_identifier:
    name: allele_identifier
    description: Identifier (curie/primary_external_id/mod_internal_id) of the allele
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: allele_identifier
    owner: AlleleImageAssociationDTO
    domain_of:
    - AlleleCellLineAssociationDTO
    - AlleleGenerationMethodAssociationDTO
    - AlleleGenomicEntityAssociationDTO
    - AlleleImageAssociationDTO
    - AlleleOriginAssociationDTO
    - AffectedGenomicModelComponentDTO
    - AllelePhenotypeAnnotationDTO
    - AlleleDiseaseAnnotationDTO
    - BioSampleGenomicInformationDTO
    range: string
    required: true
  relation_name:
    name: relation_name
    description: Name of VocabularyTerm representing relation of an Association
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: relation_name
    owner: AlleleImageAssociationDTO
    domain_of:
    - SequenceTargetingReagentGeneAssociationDTO
    - AlleleCellLineAssociationDTO
    - AlleleGenerationMethodAssociationDTO
    - AlleleGenomicEntityAssociationDTO
    - AlleleImageAssociationDTO
    - AlleleOriginAssociationDTO
    - ConstructComponentSlotAnnotationDTO
    - LocationAssociationDTO
    range: string
    required: true
  image_curie:
    name: image_curie
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: image_curie
    owner: AlleleImageAssociationDTO
    domain_of:
    - AlleleImageAssociationDTO
    range: string
    required: true
  primary_image:
    name: primary_image
    description: Can be null; if false, maybe you would show all the images. We need
      to revisit this issue.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: primary_image
    owner: AlleleImageAssociationDTO
    domain_of:
    - AlleleImageAssociation
    - AlleleImageAssociationDTO
    range: boolean
  evidence_curies:
    name: evidence_curies
    description: Curies of InformationContentEntity objects given as evidence
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    multivalued: true
    alias: evidence_curies
    owner: AlleleImageAssociationDTO
    domain_of:
    - NoteDTO
    - SlotAnnotationDTO
    - EvidenceAssociationDTO
    - GeneGeneAssociationDTO
    range: string
  created_by_curie:
    name: created_by_curie
    description: Curie of the Person object representing the individual that created
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: created_by_curie
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_created:
    name: date_created
    description: The date on which an entity was created. This can be applied to nodes
      or edges.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - creation_date
    exact_mappings:
    - dct:createdOn
    - WIKIDATA_PROPERTY:P577
    alias: date_created
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  updated_by_curie:
    name: updated_by_curie
    description: Curie of the Person object representing the individual that updated
      the entity
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    domain: AuditedObjectDTO
    alias: updated_by_curie
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObjectDTO
    range: string
  date_updated:
    name: date_updated
    description: Date on which an entity was last modified.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    aliases:
    - date_last_modified
    alias: date_updated
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_created:
    name: db_date_created
    description: The date on which an entity was created in the Alliance database.  This
      is distinct from date_created, which represents the date when the entity was
      originally created (i.e. at the MOD for imported data).
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_created
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  db_date_updated:
    name: db_date_updated
    description: Date on which an entity was last modified in the Alliance database.  This
      is distinct from date_updated, which represents the date when the entity was
      last modified and may predate import into the Alliance database.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: db_date_updated
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: datetime
  internal:
    name: internal
    description: Classifies the entity as private (for internal use) or not (for public
      use).
    notes:
    - Default value is true.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: internal
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean
    required: true
  obsolete:
    name: obsolete
    description: Entity is no longer current.
    notes:
    - Obsolete entities are preserved in the database for posterity but should not
      be publicly displayed.
    from_schema: https://github.com/alliance-genome/agr_curation_schema/alliance_schema
    alias: obsolete
    owner: AlleleImageAssociationDTO
    domain_of:
    - AuditedObject
    - AuditedObjectDTO
    range: boolean