Class: VariantGeneConsequence

URI: alliance:VariantGeneConsequence

Referenced by class

Attributes

Own

• polyphen prediction _OPT
  • Description: PolyPhen-2 prediction
  • range: String
• polyphen score _OPT
  • Description: PolyPhen-2 score between 0 and 1
  • range: Float
• sift prediction _OPT
  • Description: SIFT prediction
  • range: String
• sift score _OPT
  • Description: SIFT score between 0 and 1
  • range: Float
• variant gene consequence➞object _REQ
  • Description: object should be the gene identifier
  • range: Gene
• variant gene consequence➞subject _REQ
  • Description: subject should be the variant identifier
  • range: Variant
• vep consequence _OPT
  • range: String
• vep impact _OPT
  • Description: VEP predicted impact of variation on molecule
  • range: String

Other properties

Aliases:		gene level consequence